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Microarray



Size: 3.9 MB | License: Freeware
Category: Science
Advanced Pathway Painter This program visualizes pathways. The user can display any kind of quantitative data from gene and protein experiments directly within the pathways (colours represent the value). Automatic pathway update from KEGG, BioCarta and GenMAPP. This freeware program visualizes pathways (KEGG, BioCarta, GenMAPP, ...). The user has the possibility to display any kind of quantitative data from gene and protein experiments directly within the pathways (colours represent the value). The...
Size: 2.3 MB | License: Demo | Price: US$1229 | Category: Science
GENOM 2005 Feature rich and user friendly application for analysing array-experiments (e.g. from provider Affymetrix). It includes additional gene information, multiple analysis methods, automatic pathway mapping with an editor, function prediction... Genom 2005 is a feature rich and user friendly application for analysing array-experiments (e.g. from provider Affymetrix). It includes normalisation of raw data, additional gene information official gene names, location, function prediction,...

OS: Windows
Software Terms: Affymetrix, Analyse, Biocarta, Biology, Bioscience, Dna, Function Prediction, Genmapp, Kegg, Microarray
Size: 2.2 MB | License: Freeware | Category: Science
FacScan FacScan is a predicting tool of transcription Factor binding sites. FacScan is a predicting tool of transcription Factor binding sites. FacScan scans multiple DNA sequences, e.g. from microarray experiments, for potential binding sites of regulatory transcription factors.

OS: Windows
Software Terms: 3 - Alpha, 32-bit Ms Windows Nt 2000 Xp, Bio-informatics, C#, Developers, Development, Downloads, English, Facscan, Flat-file
Size: 1.4 MB | License: Freeware | Category: Graphical Text Tools
Java Treeview 1.1.4 R Java Treeview 1. Java Treeview 1.1.4 R5 functions as an extensible viewer for Microarray Data in the PCL or CDT format. Requirements: Java

OS: Windows
Size: 7.2 MB | License: Freeware | Category: Miscellaneous
TransMap Viewer TransMap Viewer is a special microarray data analysis program created for visualisation of gene expression data using transcription maps. TransMap Viewer is a special microarray data analysis program created for visualisation of gene expression data using transcription maps. TransMap Viewer allows you to discover clustering of highly expressed genes in chromosomal domain. Explore...

OS: Windows
Software Terms: Css, Design, Minimalistic, Phpld, Template, Xhtml
Size: 87.2 MB | License: Freeware | Category: Image Editors
Cytoscape Cytoscape is an open source program platform for visualizing complex-networks and integrating these with any type of attribute data. Cytoscape is an open source program platform for visualizing complex-networks and integrating these with any type of attribute data. A lot of plugins are available for various kinds of problem domains, including bioinformatics, social network...

Software Terms: Bioinformatics, Clustering, Computational Biology, Cytoscape, Expression, Gene, Genetic, Graph, Institute For Systems Biology, Int
Size: 212.7 KB | License: Freeware | Category: Image Editors
JTreeview Tree file viewer fast and easy. Tree file viewer fast and easy. JTreeview is a convenient, easy-to-use tool designed to help you view tree files. This viewer is limited to Newick format (or the custom save format, based on Newick). There is not really much to say about a tree...

Software Terms: Bioinformatics, Clans, Gene Expression, Genebins, Legume, Mapman, Mclip, Microarray, Mirna, Ncrna
Size: 1.8 MB | License: Freeware | Category: Misc. Applications
QSB An integrative computational tool for genetical genomics. An integrative computational tool for genetical genomics. QSB is a computational tool developed for genetical genomics, an emerging field that combines quantitative genetics and genomics. QSB takes marker genotype data and expression microarray...

Size: 11.6 MB | License: Freeware | Category: Misc. Applications
PeakFinder Locates peaks (cohesin binding sites) in yeast ChIP microarry data. Locates peaks (cohesin binding sites) in yeast ChIP microarry data. PeakFinder software was developed to find cohesin binding sites represented by the peaks in yeast chromatin immunoprecipitation (ChIP) microarray data, but can be applied to plot...

Size: 13.0 MB | License: Freeware | Category: Misc. Applications
Genome2D Genome2D visualizes a bacterial genome with all its individual genes on a single computer screen genome enables quick identification of biologically relevant information such as gene orientation, operon structure, transcriptional terminators or regulator binding sites. Bacterial genome analysis made easy.Using a simple input file subsets of genes can be visualized by single or multiple coloring or by a color gradient when values are used. The...

Size: 445.0 KB | License: Freeware | Category: Misc. Applications
GA Fuzzy Clustering GA Fuzzy Clustering is a clustering tool for microarray data. GA Fuzzy Clustering is a clustering tool for microarray data. It implements fuzzy c-mean clustering algorithm improved with Genetic algorithm to search for global optimum.Input file format:: 1. This software uses a plain text file as input. 2. All...

Size: 6.2 MB | License: Freeware | Category: Misc. Applications
StepMiner Analysis on timecourse microarray data. Analysis on timecourse microarray data. StepMiner is a new method for analyzing time course microarray data that extracts transitions between two states, up-regulated and down-regulated. For each gene, StepMiner reports the model that best matches...

Size: 1.3 MB | License: Freeware | Category: Misc. Applications
MicroSim Two-dye microarray data sets analysis made easy. Two-dye microarray data sets analysis made easy. MicroSim is an analysis of the effect of systematic errors on the use of Microarray experiment.MicroSim is a java software for analysis the effect of systematic errors on the two-dye microarray data...

Size: 673.2 KB | License: Freeware | Category: Misc. Applications
GNLab (Gene Network virtual Laboratory) Computational Pipeline for Large-Scale Gene Network Analysis. Computational Pipeline for Large-Scale Gene Network Analysis. GNLab (Gene Network virtual Laboratory) is a novel bioinformatics tool for the large-scale analysis of gene regulatory networks (GRNs). This C++ command-line tool supports the analysis...

Software Terms: Bcst, Bit, Bit Bcomm, Computer Science, Cs, Honours, Informatics, Information Systems, Information Technologies, Information Technology
Size: 3.5 MB | License: Freeware | Category: Misc. Applications
PaGE (Patterns from Gene Expression) PaGE (Patterns from Gene Expression) is free downloadable program for microarray analisys. PaGE (Patterns from Gene Expression) is free downloadable program for microarray analisys. PaGE can be used to produce sets of differentially expressed genes with confidence measures attached. These lists are generated the False Discovery Rate...